Filter AlphaFoldDB structures based on confidence (pLDDT). Keeps entries with requested number of residues which have a confidence score above the threshold. Also writes pdb files with only those ...

Artificial intelligence isn’t just changing how we search the web or generate images. It is reshaping how scientists approach one of biology’s oldest problems: the folding of proteins. Google DeepMind ...

1 School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, India 2 Department of Quantum AI, School of Computer Science and Engineering, Vellore Institute of Technology, ...

If you’re feeling overwhelmed with all the protein chatter—including a new wave of protein powders, bars, and drinks that are constantly flooding your feeds—you’re not alone. But here’s the thing: ...

“I’ll be shocked if we don’t see more and more LLM impact on science,” says John Jumper. In 2017, fresh off a PhD on theoretical chemistry, John Jumper heard rumors that Google DeepMind had moved on ...

The ScienceCodons PDB Viewer is a high-performance tool for visualizing, analyzing, and exploring macromolecular structures directly in your web browser. It offers seamless support for PDB, mmCIF, and ...

Recently, a range of effective methods have been developed for predicting protein-protein interactions (PPIs). Among them, the methods based on data derived from protein sequences and structures have ...

A new AI model is opening the black box of the leading artificial intelligence tool for predicting how proteins will interact with small molecules, such as drugs. The model, OpenFold3, which launched ...

Google DeepMind’s work with AlphaFold has been nothing short of a miracle, but it is computationally expensive. With that in mind, Apple researchers set off to develop an alternative method to use AI ...

Protein is an essential part of any healthy diet, especially if you are looking to build muscle. According to Kristi Wempen, a dietitian with the Mayo Clinic, "Protein should account for 10% to 35% of ...